Computational Biology: First International Conference on Biology, Informatics, and Mathematics, Jobim 2000, Montpellier, France, May 3-5, 2000 Selected Papers

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Edition: 1st
Format: Paperback
Pub. Date: 2001-07-01
Publisher(s): SPRINGER
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Summary

When considering the dynamics of regional growth rates, one usually observes growth convergence on spatial aggregates but non-convergence or even divergence within smaller regions of different type. This book suggests various approaches to investigate this puzzle. A formal model, merging approaches from growth theory and new economic geography, shows that spatial knowledge spillovers might be the driving force behind this behavior. To analyze an arbitrary number of regions, the model is implemented on a locally recursive simulation tool - cellular automata. Convergence regressions from different runs of the automaton confirm previous findings. Finally, the existence of spatial knowledge spillovers is tested. Regressions give strong evidence for spatial knowledge spillovers. All the relevant literature and spatial econometric methods are surveyed. Data is reproduced in the appendix.

Table of Contents

Speeding Up the DIALIGN Multiple Alignment Program by Using the `Greedy Alignment of BIOlogical Sequences LIBrary' (GABIOS-LIB)
1(11)
Said Abdeddaim
Burkhard Morgenstern
GeMCore, a Knowledge Base Dedicated to Mapping Mammalian Genomes
12(12)
Gisele Bronner
Bruno Spataro
Christian Gautier
Francois Rechenmann
Optimal Agreement Supertrees
24(8)
David Bryant
Segmentation by Maximal Predictive Partitioning According to Composition Biases
32(13)
Laurent Gueguen
Can We Have Confidence in a Tree Representation?
45(12)
Alain Guenoche
Henri Garreta
Bayesian Approach to DNA Segmentation into Regions with Different Average Nucleotide Composition
57(17)
Vsevolod Makeev
Vasily Ramensky
Mikhail Gelfand
Mikhail Roytberg
Vladimir Tumanyan
Exact and Asymptotic Distribution of the Local Score of One i.i.d. Random Sequence
74(10)
Sabine Mercier
Dominique Cellier
Francois Charlot
Jean-Jacques Daudin
Phylogenetic Reconstruction Algorithms Based on Weighted 4-Trees
84(15)
Vincent Ranwez
Olivier Gascuel
Computational Complexity of Word Counting
99(12)
Mireille Regnier
EUGENE: An Eukaryotic Gene Finder That Combines Several Sources of Evidence
111(15)
Thomas Schiex
Annick Moisan
Pierre Rouze
Tree Reconstruction via a Closure Operation on Partial Splits
126(9)
Charles Semple
Mike Steel
InterDB, a Prediction-Oriented Protein Interaction Database for C. elegans
135(12)
Nicolas Thierry-Mieg
Laurent Trilling
Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data
147(18)
Jacques van Helden
David Gilbert
Lorenz Wernisch
Michael Schroeder
Shoshana Wodak
Author Index 165

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